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Teichlab / celltypist

A tool for semi-automatic cell type classification
https://www.celltypist.org/
MIT License
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Adult_Mouse_Gut cell types #53

Closed ejc043 closed 1 year ago

ejc043 commented 1 year ago

Hello! Might the team have the publications where the Adult_Mouse_Gut model derived its cell types? It says 'TBD' in the celltypist site.

ChuanXu1 commented 1 year ago

@ejc043, the preprint is here https://www.biorxiv.org/content/10.1101/2022.08.26.505428v2. I will add the link to the model soon.

ejc043 commented 1 year ago

@ChuanXu1 Thanks!

ejc043 commented 1 year ago

Hi @ChuanXu1 , there are some celltypes where the preprint you've linked does not reference e.g. glia cells Do you know if there is a separate publication where those celltype annotations were derived from? Thank you again, Eunice

ChuanXu1 commented 1 year ago

@ejc043 , table here stats_mouse_gut.xlsx

ejc043 commented 1 year ago

@ChuanXu1 This is great thank you so much!!