Closed anton-khodak closed 3 years ago
This variable must be set according to https://github.com/Teichlab/tracer#installing-igblast, otherwise assembly fails with BLAST query/options error: Germline annotation database mouse/mouse_TR_V could not be found in [internal_data] directory
assembly
BLAST query/options error: Germline annotation database mouse/mouse_TR_V could not be found in [internal_data] directory
Hi @anton-khodak,
The IGDATA environment variable is currently set in https://github.com/Teichlab/tracer/blob/master/docker_helper_files/docker_wrapper.sh. Is that not working for you?
IGDATA
This variable must be set according to https://github.com/Teichlab/tracer#installing-igblast, otherwise
assembly
fails withBLAST query/options error: Germline annotation database mouse/mouse_TR_V could not be found in [internal_data] directory