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Telecommunication-Telemedia-Assessment / bitstream_mode3_p1204_3

Open source reference implementation of ITU-T P.1204.3
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Scipy dependency error? #1

Closed slhck closed 4 years ago

slhck commented 4 years ago 
➜ poetry install
Creating virtualenv p1204-3-b6bWgmlv-py3.8 in /Users/werner/Library/Caches/pypoetry/virtualenvs
Installing dependencies from lock file

Package operations: 16 installs, 0 updates, 0 removals

  - Installing pyparsing (2.4.6)
  - Installing six (1.13.0)
  - Installing atomicwrites (1.3.0)
  - Installing attrs (19.3.0)
  - Installing more-itertools (8.0.2)
  - Installing numpy (1.18.0)
  - Installing packaging (20.0)
  - Installing pluggy (0.13.1)
  - Installing py (1.8.1)
  - Installing python-dateutil (2.8.1)
  - Installing pytz (2019.3)
  - Installing wcwidth (0.1.8)
  - Installing pandas (0.25.3)
  - Installing pytest (4.6.9)
  - Installing scikit-learn (0.19.1)

[EnvCommandError]
Command ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/bin/pip', 'install', '--no-deps', 'scikit-learn==0.19.1'] errored with the following return code 1, and output: 
Collecting scikit-learn==0.19.1
  Using cached https://files.pythonhosted.org/packages/f5/2c/5edf2488897cad4fb8c4ace86369833552615bf264460ae4ef6e1f258982/scikit-learn-0.19.1.tar.gz
Installing collected packages: scikit-learn
  Running setup.py install for scikit-learn: started
    Running setup.py install for scikit-learn: finished with status 'error'
    ERROR: Command errored out with exit status 1:
     command: /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/bin/python3.8 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py'"'"'; __file__='"'"'/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-record-1ij10q6x/install-record.txt --single-version-externally-managed --compile --install-headers /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/include/site/python3.8/scikit-learn
         cwd: /private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/
    Complete output (15 lines):
    Partial import of sklearn during the build process.
    Traceback (most recent call last):
      File "/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py", line 148, in get_scipy_status
        import scipy
    ModuleNotFoundError: No module named 'scipy'
    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py", line 269, in <module>
        setup_package()
      File "/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py", line 257, in setup_package
        raise ImportError("Scientific Python (SciPy) is not "
    ImportError: Scientific Python (SciPy) is not installed.
    scikit-learn requires SciPy >= 0.13.3.
    Installation instructions are available on the scikit-learn website: http://scikit-learn.org/stable/install.html

    ----------------------------------------
ERROR: Command errored out with exit status 1: /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/bin/python3.8 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py'"'"'; __file__='"'"'/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-zopx62xi/scikit-learn/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-record-1ij10q6x/install-record.txt --single-version-externally-managed --compile --install-headers /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/include/site/python3.8/scikit-learn Check the logs for full command output

Does this have to do with the scikit-learn frozen dependency?

When I comment out the dependency, I can install Scipy, but then, when installing Scikit-Learn, I get:

[EnvCommandError]
Command ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/bin/pip', 'install', '--no-deps', 'scikit-learn==0.19.1'] errored with the following return code 1, and output: 
Collecting scikit-learn==0.19.1
  Using cached https://files.pythonhosted.org/packages/f5/2c/5edf2488897cad4fb8c4ace86369833552615bf264460ae4ef6e1f258982/scikit-learn-0.19.1.tar.gz
Installing collected packages: scikit-learn
  Running setup.py install for scikit-learn: started
    Running setup.py install for scikit-learn: finished with status 'error'
    ERROR: Command errored out with exit status 1:
     command: /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/bin/python3.8 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-ah_ey07g/scikit-learn/setup.py'"'"'; __file__='"'"'/private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-ah_ey07g/scikit-learn/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-record-kk9yl09m/install-record.txt --single-version-externally-managed --compile --install-headers /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/include/site/python3.8/scikit-learn
         cwd: /private/var/folders/xr/f7sr_4_x33q4d51k3bh995080000gn/T/pip-install-ah_ey07g/scikit-learn/
    Complete output (693 lines):
    Partial import of sklearn during the build process.
    blas_opt_info:
    blas_mkl_info:
    customize UnixCCompiler
      libraries mkl_rt not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    blis_info:
      libraries blis not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    openblas_info:
      libraries openblas not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    atlas_3_10_blas_threads_info:
    Setting PTATLAS=ATLAS
      libraries tatlas not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    atlas_3_10_blas_info:
      libraries satlas not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    atlas_blas_threads_info:
    Setting PTATLAS=ATLAS
      libraries ptf77blas,ptcblas,atlas not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    atlas_blas_info:
      libraries f77blas,cblas,atlas not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
      NOT AVAILABLE

    accelerate_info:
      libraries accelerate not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
    Library accelerate was not found. Ignoring
      libraries veclib not found in ['/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib', '/usr/local/lib', '/usr/lib']
    Library veclib was not found. Ignoring
      FOUND:
        extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
        extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
        define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

      FOUND:
        extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
        extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
        define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]

    running install
    running build
    running config_cc
    unifing config_cc, config, build_clib, build_ext, build commands --compiler options
    running config_fc
    unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
    running build_src
    build_src
    building library "libsvm-skl" sources
    building extension "sklearn.__check_build._check_build" sources
    building extension "sklearn.cluster._dbscan_inner" sources
    building extension "sklearn.cluster._hierarchical" sources
    building extension "sklearn.cluster._k_means_elkan" sources
    building extension "sklearn.cluster._k_means" sources
    building extension "sklearn.datasets._svmlight_format" sources
    building extension "sklearn.decomposition._online_lda" sources
    building extension "sklearn.decomposition.cdnmf_fast" sources
    building extension "sklearn.ensemble._gradient_boosting" sources
    building extension "sklearn.feature_extraction._hashing" sources
    building extension "sklearn.manifold._utils" sources
    building extension "sklearn.manifold._barnes_hut_tsne" sources
    building extension "sklearn.metrics.pairwise_fast" sources
    building extension "sklearn.metrics/cluster.expected_mutual_info_fast" sources
    building extension "sklearn.neighbors.ball_tree" sources
    building extension "sklearn.neighbors.kd_tree" sources
    building extension "sklearn.neighbors.dist_metrics" sources
    building extension "sklearn.neighbors.typedefs" sources
    building extension "sklearn.neighbors.quad_tree" sources
    building extension "sklearn.tree._tree" sources
    building extension "sklearn.tree._splitter" sources
    building extension "sklearn.tree._criterion" sources
    building extension "sklearn.tree._utils" sources
    building extension "sklearn.svm.libsvm" sources
    building extension "sklearn.svm.liblinear" sources
    building extension "sklearn.svm.libsvm_sparse" sources
    building extension "sklearn._isotonic" sources
    building extension "sklearn.linear_model.cd_fast" sources
    building extension "sklearn.linear_model.sgd_fast" sources
    building extension "sklearn.linear_model.sag_fast" sources
    building extension "sklearn.utils.sparsefuncs_fast" sources
    building extension "sklearn.utils.arrayfuncs" sources
    building extension "sklearn.utils.murmurhash" sources
    building extension "sklearn.utils.lgamma" sources
    building extension "sklearn.utils.graph_shortest_path" sources
    building extension "sklearn.utils.fast_dict" sources
    building extension "sklearn.utils.seq_dataset" sources
    building extension "sklearn.utils.weight_vector" sources
    building extension "sklearn.utils._random" sources
    building extension "sklearn.utils._logistic_sigmoid" sources
    building data_files sources
    build_src: building npy-pkg config files
    running build_py
    creating build
    creating build/lib.macosx-10.14-x86_64-3.8
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/learning_curve.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/multiclass.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/kernel_approximation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/random_projection.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/isotonic.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/multioutput.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/kernel_ridge.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/naive_bayes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/pipeline.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/grid_search.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/discriminant_analysis.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/exceptions.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/dummy.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/calibration.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    copying sklearn/cross_validation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/__check_build
    copying sklearn/__check_build/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/__check_build
    copying sklearn/__check_build/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/__check_build
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/_build_utils
    copying sklearn/_build_utils/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/_build_utils
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    copying sklearn/covariance/graph_lasso_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    copying sklearn/covariance/robust_covariance.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    copying sklearn/covariance/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    copying sklearn/covariance/empirical_covariance_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    copying sklearn/covariance/outlier_detection.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    copying sklearn/covariance/shrunk_covariance_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance/tests
    copying sklearn/covariance/tests/test_graph_lasso.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance/tests
    copying sklearn/covariance/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance/tests
    copying sklearn/covariance/tests/test_covariance.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance/tests
    copying sklearn/covariance/tests/test_robust_covariance.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/covariance/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition
    copying sklearn/cross_decomposition/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition
    copying sklearn/cross_decomposition/cca_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition
    copying sklearn/cross_decomposition/pls_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition/tests
    copying sklearn/cross_decomposition/tests/test_pls.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition/tests
    copying sklearn/cross_decomposition/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/cross_decomposition/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/rfe.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/variance_threshold.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/univariate_selection.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/mutual_info_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    copying sklearn/feature_selection/from_model.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_variance_threshold.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_rfe.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_from_model.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_feature_select.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_chi2.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    copying sklearn/feature_selection/tests/test_mutual_info.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/feature_selection/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/gaussian_process.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/gpr.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/correlation_models.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/regression_models.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/gpc.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    copying sklearn/gaussian_process/kernels.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process/tests
    copying sklearn/gaussian_process/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process/tests
    copying sklearn/gaussian_process/tests/test_gpr.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process/tests
    copying sklearn/gaussian_process/tests/test_kernels.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process/tests
    copying sklearn/gaussian_process/tests/test_gpc.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process/tests
    copying sklearn/gaussian_process/tests/test_gaussian_process.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/gaussian_process/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    copying sklearn/mixture/gmm.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    copying sklearn/mixture/dpgmm.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    copying sklearn/mixture/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    copying sklearn/mixture/bayesian_mixture.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    copying sklearn/mixture/gaussian_mixture.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    copying sklearn/mixture/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture/tests
    copying sklearn/mixture/tests/test_bayesian_mixture.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture/tests
    copying sklearn/mixture/tests/test_gmm.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture/tests
    copying sklearn/mixture/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture/tests
    copying sklearn/mixture/tests/test_gaussian_mixture.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture/tests
    copying sklearn/mixture/tests/test_dpgmm.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/mixture/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/model_selection
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    copying sklearn/manifold/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold
    copying sklearn/manifold/isomap.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold
    copying sklearn/manifold/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold
    copying sklearn/manifold/spectral_embedding_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    copying sklearn/manifold/tests/test_isomap.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    copying sklearn/manifold/tests/test_mds.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    copying sklearn/manifold/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    copying sklearn/manifold/tests/test_t_sne.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    copying sklearn/manifold/tests/test_spectral_embedding.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    copying sklearn/manifold/tests/test_locally_linear.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/manifold/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/regression.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/classification.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/pairwise.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/ranking.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    copying sklearn/metrics/scorer.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/test_common.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/test_score_objects.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/test_ranking.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/test_pairwise.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/test_classification.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    copying sklearn/metrics/tests/test_regression.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster
    copying sklearn/metrics/cluster/bicluster.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster
    copying sklearn/metrics/cluster/unsupervised.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster
    copying sklearn/metrics/cluster/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster
    copying sklearn/metrics/cluster/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster
    copying sklearn/metrics/cluster/supervised.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster/tests
    copying sklearn/metrics/cluster/tests/test_supervised.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster/tests
    copying sklearn/metrics/cluster/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster/tests
    copying sklearn/metrics/cluster/tests/test_bicluster.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster/tests
    copying sklearn/metrics/cluster/tests/test_unsupervised.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/metrics/cluster/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/lof.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/regression.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/approximate.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/unsupervised.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/classification.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/graph.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/kde.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/nearest_centroid.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    copying sklearn/neighbors/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_nearest_centroid.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_kde.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_dist_metrics.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_lof.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_kd_tree.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_approximate.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_neighbors.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_quad_tree.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    copying sklearn/neighbors/tests/test_ball_tree.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/neighbors/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/tree
    copying sklearn/tree/tree.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree
    copying sklearn/tree/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree
    copying sklearn/tree/export.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree
    copying sklearn/tree/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/tree/tests
    copying sklearn/tree/tests/test_tree.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree/tests
    copying sklearn/tree/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree/tests
    copying sklearn/tree/tests/test_export.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tree/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/svm
    copying sklearn/svm/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm
    copying sklearn/svm/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm
    copying sklearn/svm/classes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm
    copying sklearn/svm/bounds.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm
    copying sklearn/svm/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/svm/tests
    copying sklearn/svm/tests/test_sparse.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm/tests
    copying sklearn/svm/tests/test_bounds.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm/tests
    copying sklearn/svm/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm/tests
    copying sklearn/svm/tests/test_svm.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/svm/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/ransac.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/perceptron.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/least_angle.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/logistic.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/coordinate_descent.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/randomized_l1.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/sag.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/bayes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/omp.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/passive_aggressive.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/stochastic_gradient.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/huber.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/ridge.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/theil_sen.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    copying sklearn/linear_model/base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_logistic.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_sgd.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_huber.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_bayes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_theil_sen.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_ridge.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_passive_aggressive.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_randomized_l1.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_least_angle.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_ransac.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_coordinate_descent.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_sparse_coordinate_descent.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_perceptron.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_sag.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    copying sklearn/linear_model/tests/test_omp.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/linear_model/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/optimize.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/fixes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/deprecation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/estimator_checks.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/multiclass.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/graph.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/random.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/bench.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/_scipy_sparse_lsqr_backport.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/mocking.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/stats.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/class_weight.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/metaestimators.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/extmath.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/testing.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/arpack.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/sparsefuncs.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/linear_assignment_.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    copying sklearn/utils/validation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/sparsetools
    copying sklearn/utils/sparsetools/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/sparsetools
    copying sklearn/utils/sparsetools/setup.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/sparsetools
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/sparsetools/tests
    copying sklearn/utils/sparsetools/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/sparsetools/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_deprecation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_bench.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_utils.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_metaestimators.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_seq_dataset.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_stats.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_validation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_optimize.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_shortest_path.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_fast_dict.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_class_weight.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_estimator_checks.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_multiclass.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_fixes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_sparsefuncs.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_murmurhash.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_linear_assignment.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_graph.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_extmath.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_random.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    copying sklearn/utils/tests/test_testing.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/utils/tests
    creating build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_metaestimators.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_common.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_multioutput.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_isotonic.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_cross_validation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_docstring_parameters.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_dummy.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_check_build.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_discriminant_analysis.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_multiclass.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_config.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_kernel_ridge.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_calibration.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_naive_bayes.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_learning_curve.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_base.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_init.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_grid_search.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_pipeline.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_random_projection.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    copying sklearn/tests/test_kernel_approximation.py -> build/lib.macosx-10.14-x86_64-3.8/sklearn/tests
    running build_clib
    customize UnixCCompiler
    #### ['clang', '-Wno-unused-result', '-Wsign-compare', '-Wunreachable-code', '-DNDEBUG', '-g', '-fwrapv', '-O3', '-Wall', '-I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include', '-I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include'] #######
    customize UnixCCompiler using build_clib
    building 'libsvm-skl' library
    compiling C++ sources
    C compiler: clang++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include

    creating build/temp.macosx-10.14-x86_64-3.8
    creating build/temp.macosx-10.14-x86_64-3.8/sklearn
    creating build/temp.macosx-10.14-x86_64-3.8/sklearn/svm
    creating build/temp.macosx-10.14-x86_64-3.8/sklearn/svm/src
    creating build/temp.macosx-10.14-x86_64-3.8/sklearn/svm/src/libsvm
    compile options: '-I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -c'
    clang++: sklearn/svm/src/libsvm/libsvm_template.cpp
    ar: adding 1 object files to build/temp.macosx-10.14-x86_64-3.8/liblibsvm-skl.a
    ranlib:@ build/temp.macosx-10.14-x86_64-3.8/liblibsvm-skl.a
    running build_ext
    customize UnixCCompiler
    customize UnixCCompiler using build_ext
    customize UnixCCompiler
    #### ['clang', '-Wno-unused-result', '-Wsign-compare', '-Wunreachable-code', '-DNDEBUG', '-g', '-fwrapv', '-O3', '-Wall', '-I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include', '-I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include'] #######
    customize UnixCCompiler using build_ext
    building 'sklearn.__check_build._check_build' extension
    compiling C sources
    C compiler: clang -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include

    creating build/temp.macosx-10.14-x86_64-3.8/sklearn/__check_build
    compile options: '-I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/include -I/Users/werner/.pyenv/versions/3.8.1/include/python3.8 -c'
    clang: sklearn/__check_build/_check_build.c
    clang -bundle -undefined dynamic_lookup -L/usr/local/opt/readline/lib -L/usr/local/opt/readline/lib -L/Users/werner/.pyenv/versions/3.8.1/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/readline/lib -L/Users/werner/.pyenv/versions/3.8.1/lib build/temp.macosx-10.14-x86_64-3.8/sklearn/__check_build/_check_build.o -Lbuild/temp.macosx-10.14-x86_64-3.8 -o build/lib.macosx-10.14-x86_64-3.8/sklearn/__check_build/_check_build.cpython-38-darwin.so
    building 'sklearn.cluster._dbscan_inner' extension
    compiling C++ sources
    C compiler: clang++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include

    creating build/temp.macosx-10.14-x86_64-3.8/sklearn/cluster
    compile options: '-I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/include -I/Users/werner/.pyenv/versions/3.8.1/include/python3.8 -c'
    clang++: sklearn/cluster/_dbscan_inner.cpp
    In file included from sklearn/cluster/_dbscan_inner.cpp:514:
    In file included from /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4:
    In file included from /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:
    In file included from /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1832:
    /Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with "          "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
    #warning "Using deprecated NumPy API, disable it with " \
     ^
    sklearn/cluster/_dbscan_inner.cpp:5960:21: error: no member named 'exc_type' in '_ts'
        *type = tstate->exc_type;
                ~~~~~~  ^
    sklearn/cluster/_dbscan_inner.cpp:5961:22: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
        *value = tstate->exc_value;
                         ^~~~~~~~~
                         curexc_value
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:79:15: note: 'curexc_value' declared here
        PyObject *curexc_value;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:5962:19: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
        *tb = tstate->exc_traceback;
                      ^~~~~~~~~~~~~
                      curexc_traceback
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:80:15: note: 'curexc_traceback' declared here
        PyObject *curexc_traceback;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:5969:24: error: no member named 'exc_type' in '_ts'
        tmp_type = tstate->exc_type;
                   ~~~~~~  ^
    sklearn/cluster/_dbscan_inner.cpp:5970:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
        tmp_value = tstate->exc_value;
                            ^~~~~~~~~
                            curexc_value
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:79:15: note: 'curexc_value' declared here
        PyObject *curexc_value;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:5971:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
        tmp_tb = tstate->exc_traceback;
                         ^~~~~~~~~~~~~
                         curexc_traceback
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:80:15: note: 'curexc_traceback' declared here
        PyObject *curexc_traceback;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:5972:13: error: no member named 'exc_type' in '_ts'
        tstate->exc_type = type;
        ~~~~~~  ^
    sklearn/cluster/_dbscan_inner.cpp:5973:13: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
        tstate->exc_value = value;
                ^~~~~~~~~
                curexc_value
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:79:15: note: 'curexc_value' declared here
        PyObject *curexc_value;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:5974:13: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
        tstate->exc_traceback = tb;
                ^~~~~~~~~~~~~
                curexc_traceback
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:80:15: note: 'curexc_traceback' declared here
        PyObject *curexc_traceback;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:6029:24: error: no member named 'exc_type' in '_ts'
        tmp_type = tstate->exc_type;
                   ~~~~~~  ^
    sklearn/cluster/_dbscan_inner.cpp:6030:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
        tmp_value = tstate->exc_value;
                            ^~~~~~~~~
                            curexc_value
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:79:15: note: 'curexc_value' declared here
        PyObject *curexc_value;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:6031:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
        tmp_tb = tstate->exc_traceback;
                         ^~~~~~~~~~~~~
                         curexc_traceback
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:80:15: note: 'curexc_traceback' declared here
        PyObject *curexc_traceback;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:6032:13: error: no member named 'exc_type' in '_ts'
        tstate->exc_type = local_type;
        ~~~~~~  ^
    sklearn/cluster/_dbscan_inner.cpp:6033:13: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
        tstate->exc_value = local_value;
                ^~~~~~~~~
                curexc_value
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:79:15: note: 'curexc_value' declared here
        PyObject *curexc_value;
                  ^
    sklearn/cluster/_dbscan_inner.cpp:6034:13: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
        tstate->exc_traceback = local_tb;
                ^~~~~~~~~~~~~
                curexc_traceback
    /Users/werner/.pyenv/versions/3.8.1/include/python3.8/cpython/pystate.h:80:15: note: 'curexc_traceback' declared here
        PyObject *curexc_traceback;
                  ^
    1 warning and 15 errors generated.
    error: Command "clang++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/lib/python3.8/site-packages/numpy/core/include -I/Users/werner/Library/Caches/pypoetry/virtualenvs/p1204-3-b6bWgmlv-py3.8/include -I/Users/werner/.pyenv/versions/3.8.1/include/python3.8 -c sklearn/cluster/_dbscan_inner.cpp -o build/temp.macosx-10.14-x86_64-3.8/sklearn/cluster/_dbscan_inner.o -MMD -MF build/temp.macosx-10.14-x86_64-3.8/sklearn/cluster/_dbscan_inner.o.d" failed with exit status 1
slhck commented 4 years ago

@stg7 @rakeshraor Updating to scikit-learn 0.20.0 or higher fixes the installation issue. Can this be safely updated?

I tested both under macOS and Ubuntu, as well as Python 3.7 and 3.8.

stg7 commented 4 years ago

solved in ca63f8d0089e047b590e351ded5fc38d02013c38