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TencentAILabHealthcare / scTranslator

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Max number of proteins #5

Open cchen22 opened 4 months ago

cchen22 commented 4 months ago

Hello,

Thank you for creating this amazing tool!

I noticed that the pre-trained model can predict the abundance of up to 1000 proteins. What steps should I take if I need to predict the abundance of more than 1000 proteins?

ElaineLIU-920 commented 2 months ago

Hello,

Thank you for your feedback!

You can predict the abundance of more than 1000 proteins by making multiple calls to scTranslator. By dividing your protein list into smaller batches, each containing up to 1000 proteins, and then making separate calls for each batch, you can obtain predictions for a larger number of proteins.

If you have any further questions, feel free to ask.