Closed AdorableYoyo closed 1 week ago
Hi,
Thank you for your interest in scTranslator.
As mentioned in our manuscript, the complete Seurat PBMC data can be accessed from this link. We did not perform any gene filtering and matched scTranslatorID using entrezID.
For the evaluation of the few-shot case on the Seurat PBMC dataset, we used only 20 cells from the remaining 10% of the dataset and fine-tuned on the pre-trained model. The pre-trained model was trained with shuffled gene positions for each cell, whereas for the few-shot evaluation, the genes were aligned.
Thank you!
Hi,
Thanks for the awesome work and repository.
I have two questions: