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TencentAILabHealthcare / spatialID

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functions in pyc file #1

Open MarijaI opened 1 year ago

MarijaI commented 1 year ago

In order to execute the first example for Spatial-ID it is necessary to import from cell_type_annotation_model import DNNModel, SpatialModelTrainer Cell type annotation model is only available in .pyc file, that is, I assume, compiled for some specific CPU. Could you, maybe, provide corresponding .py file or provide instruction how to overcome this issue?

Thanks in advance, Marija

SilversH commented 1 year ago

Hi, we have test .pyc file can be used in the same way as .py file when importing functions. Have you tried to run one of the scripts? Did any problems ocurr?

ZifengLyu commented 1 year ago

Sry, I can't import pyc file due to a error named "bad magic number in 'cell_type_annotation_model': b'\n\n\n\n'", it is caused by the version of python compiling py to pyc file, could you solve this problem?

SilversH commented 1 year ago

Hi, I've test this error, simply downgrading to pytorch 1.8 would solve it.