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The-Data-Alchemists-Manipal / MindWave

MindWave is an open-source project designed for beginners to learn about data science, machine learning, deep learning, and reinforcement learning algorithms using Python. The project offers a platform for implementing relevant algorithms, with open-source tools and libraries.
MIT License
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Network Analysis and Link Prediction on SNAP Polypharmacy side effect association network. #619

Open ananyajandhyala opened 11 months ago

ananyajandhyala commented 11 months ago

Is your feature request related to a problem? Please describe.

The goal is to analyze a network of drugs and their associated side effects in order to identify patterns and structures within the network, and to predict which side effects are likely to occur when patients take certain drug combinations. The edges in this network indicate which side effects are associated with drug pairs, and cannot be attributed to either individual drug in the pair. Network analysis techniques can be used to gain insights into the relationships between drugs and side effects, while link prediction techniques can be applied to predict which drug combinations are likely to cause certain side effects.

Describe the solution you'd like

● Plot a drug-drug interaction graph for the given dataset with side effects as a label.

● Perform the required EDA and some graph metrics for the top three side effects with centrality analysis.

● Node2vec for link prediction, along with using four different types of operators and evaluating which is the best.

Describe alternatives you've considered

No response

Additional context

No response

Code of Conduct

khusheekapoor commented 11 months ago

@ananyajandhyala - you can go ahead! We are assigning you 21 days for this project, after which it will be assigned to someone else if not completed. All the best! Name the file as: algorithm_dataset.ipynb and link it in the readme of the labeled directory as algorithm - dataset.

ananyajandhyala commented 11 months ago

Unable to push due to denied access. Kindly rectify.

On Sun, Jul 9, 2023 at 11:06 PM Khushee Kapoor @.***> wrote:

Assigned #619 https://github.com/The-Data-Alchemists-Manipal/MindWave/issues/619 to @ananyajandhyala https://github.com/ananyajandhyala.

— Reply to this email directly, view it on GitHub https://github.com/The-Data-Alchemists-Manipal/MindWave/issues/619#event-9767602254, or unsubscribe https://github.com/notifications/unsubscribe-auth/AS3OXYYMILHRVCJVBZU63MLXPLTYFANCNFSM6AAAAAA2AX2PGU . You are receiving this because you were assigned.Message ID: <The-Data-Alchemists-Manipal/MindWave/issue/619/issue_event/9767602254@ github.com>

ananyajandhyala commented 11 months ago

fixed.