TheAxonLab / hcph-sops

SOPs of the HCPh project
https://www.axonlab.org/hcph-sops/
Creative Commons Attribution 4.0 International
0 stars 6 forks source link

ENH: perform QCT analysis in subject space #479

Closed celprov closed 5 months ago

celprov commented 5 months ago

fix: do not exclude sessions anymore, as we have now managed to successfully run all sessions through fMRIPrep, and the issue with the event file of ses-039 has been fixed. fix: do not copy the affine anymore, as the images in the subject space have completely different affines. This also means the images are resampled to the same space before running the first-level model enh: load the T1w image preprocessed by fMRIPrep to plot activation on top enh: generate a mosaic of all possible PE direction contrasts