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TheAxonLab
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hcph-sops
SOPs of the HCPh project
https://www.axonlab.org/hcph-sops/
Creative Commons Attribution 4.0 International
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Define what means for susceptibility distortion to be large
#453
celprov
opened
6 months ago
0
Add QC criteria for T2w anatomical
#452
celprov
opened
6 months ago
0
Modify FC to be computed from surfaces
#451
celprov
opened
6 months ago
0
Write SOP for clinical acquisition
#450
celprov
opened
6 months ago
0
Add SIMON dataset in Table 2
#449
celprov
opened
6 months ago
0
Add CNeuroMod dataset in Table 2
#448
celprov
opened
6 months ago
0
[Manuscript] Adapt Table 3 and Table 4 as we will acquire multi-echo on the clinical scanner as well
#447
celprov
opened
6 months ago
0
Should we remove the "Extended reports shared across echos" section of the MRIQC report?
#446
celprov
opened
6 months ago
0
FIX: Add replacement in heudiconv recipe
#445
oesteban
closed
7 months ago
0
ENH: implement a QC checkpoint after denoising and FC extraction
#444
celprov
closed
6 months ago
0
Exclusion criteria missing for T2* GM values of fMRIPrep visual report
#443
celprov
opened
8 months ago
0
Exclusion criteria missing for T2* map of fMRIPrep visual report
#442
celprov
opened
8 months ago
0
Exclusion criteria missing for anatomical conformation section of fMRIPrep visual report
#441
celprov
opened
8 months ago
0
FIX: revisit preprocessed data QC
#440
celprov
closed
6 months ago
2
Compile figures of the QC checkpoints on denoised data into an HTML report
#439
celprov
closed
5 months ago
1
Allow to tweak confounds regressed for FC extraction
#438
celprov
opened
8 months ago
0
FIX: Rescue *Psychopy* logs of pilot and excluded sessions
#437
oesteban
closed
8 months ago
0
ENH: Add editor of ``B0FieldSource``
#436
oesteban
closed
8 months ago
0
ENH: Add script to normalize fieldmap metadata
#435
oesteban
closed
8 months ago
0
FIX: Remove unnecessary schedule
#434
oesteban
closed
8 months ago
0
ENH: Improve the ppjson module
#433
oesteban
closed
8 months ago
0
We could be more explicit about how to set the calibrations points for GA calibration
#432
celprov
opened
8 months ago
0
Testing the synchronization server : what output corresponds to a successful installation?
#431
celprov
opened
8 months ago
0
Clarification needed about Dropbox configuration
#430
celprov
opened
8 months ago
0
Missing information in creating the AcqKnowledge's template graph file
#429
celprov
opened
8 months ago
1
FIX: Update script for more reliable conversion
#428
oesteban
closed
8 months ago
0
BUG: Overlenient parsing of *Psychopy*'s log inserting offset in events file
#427
oesteban
opened
8 months ago
0
FIX: Revert ET converstion to follow current BIDS specs (abandoning BIDS020)
#426
oesteban
closed
8 months ago
2
MAINT: Update mkdocs-material and update deprecated plugins
#425
oesteban
closed
8 months ago
0
ENH: Add bugfix script to revise PE of *b0* fieldmaps
#424
oesteban
closed
8 months ago
1
FIX: Housekeeping - broken links, missing section, update ET conversion
#423
oesteban
closed
8 months ago
1
Move FC report generation to nireports
#422
celprov
opened
8 months ago
1
ENH: implement QC checkpoint after FC extraction
#421
celprov
closed
7 months ago
1
Error in description of the NSD dataset (Table 2).
#420
oesteban
opened
8 months ago
0
Exclusion criteria missing for some fMRIPrep visual report sections
#419
celprov
closed
8 months ago
2
DWI MRIQC report were not generated
#418
celprov
opened
8 months ago
2
Running fMRIPrep roadmap
#417
celprov
opened
8 months ago
0
FIX: Leftover from boilerplate
#416
oesteban
closed
8 months ago
0
FIX: Parser crashes when calibration messages exist but no calibration was run
#415
oesteban
closed
9 months ago
0
STY: improve QC of unprocessed data
#414
celprov
closed
6 months ago
3
ENH: Add a Jupyter notebook on ET's data QC
#413
oesteban
closed
8 months ago
0
ENH: Add section describing the EDF to BIDS conversion code
#412
oesteban
closed
10 months ago
0
FIX: Include missing steps regarding how Dropbox is used to synchronize physio
#411
esavary
closed
8 months ago
0
FIX: schedule.tsv
#410
esavary
closed
10 months ago
0
Units of the respiration belt
#409
celprov
opened
10 months ago
7
ENH: add QCT activation analysis notebook
#408
celprov
closed
10 months ago
0
FIX: PyBIDS MUST be called with ``--index-metadata``
#407
oesteban
closed
10 months ago
0
Pass a reference affine to fMRIPrep
#406
celprov
closed
7 months ago
0
FIX: Install *PyBIDS* to generate the PyBIDS cache
#404
celprov
closed
10 months ago
0
ENH: Add *PyBIDS*' indexing and address BIDS-Validator errors
#403
oesteban
closed
10 months ago
1
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