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TheFraserLab / ASEr

Get ASE counts from BAMs or raw fastq data -- repackage of pipeline by Carlo Artieri
MIT License
6 stars 3 forks source link

Autotest #10

Closed petercombs closed 8 years ago

petercombs commented 8 years ago

Scripts (and modifications to CountSNPASE) that allow for relatively easy testing of consistent output.

Just type make test and if it runs cleanly, then the code does exactly the same thing as the old code.

MikeDacre commented 8 years ago

I just added a pytest addition to this, could you look at it and it you like it merge that first, and then I can manually merge this branch on the command line, since there are a couple of conflicts with master.