Reason for Setting self_bp to 8000

TheJacksonLaboratory / ChIA-PIPE

ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization

MIT License

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Reason for Setting self_bp to 8000 #4

Open jinkang1234 opened 2 weeks ago

jinkang1234 commented 2 weeks ago

Dear ChIA-PIPE developers,

I am wondering why the default value of the parameter self_bp is set to 8000 to remove self-ligation. Could you please clarify if there is a specific reason for choosing 8000 as the value?

Thank you for your attention to this matter. I look forward to your response.