TheJacksonLaboratory / PDXintegrator

Code for mapping PDX Net data to a common data model
http://pdxintegrator.readthedocs.io/en/latest/
MIT License
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PDXNet entities annotation #7

Open adamstanojevic opened 6 years ago

adamstanojevic commented 6 years ago

Hi guys! Related to https://github.com/TheJacksonLaboratory/PDXintegrator/issues/6 also. On schema/model level it would be great for RDF data simulate produces to have definitions like : j.0:pdxmodel_hasDiagnosis rdf:type owl:ObjectProperty . j.0:pdxmodel_hasDiagnosis rdfs:label "Defining inital diagnosis with code from NCIT." . j.0:pdxmodel_ageBinUpperRange rdf:type owl:DatatypeProperty ; rdfs:label "Upper bin range of patient age" . or for added concept j.0:pdxmodel_Patient we mentioned in https://github.com/TheJacksonLaboratory/PDXintegrator/issues/6 it would be useful to have: j.0:pdxmodel_Patient rdf:type owl:Class ; rdfs:label "PDXNet patient model" . Having these would help us in number of ways. A lot of useful data about RDF could be inferred and we could thus reuse NCIT or other descriptions that could be found in rdfs:label . Thanks, Adam