TheJacksonLaboratory / cs-nf-pipelines

The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines
MIT License
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Merge RSEM counts and TPM across samples #4

Closed BrianSanderson closed 2 months ago

BrianSanderson commented 5 months ago

Adapted a module from the nf-core RNA-seq workflow to merge counts across samples and output 4 additional tables to the top-level pubdir 1) gene counts, 2) gene TPM, 3) isoform counts, 4) isoform TPM