LOINC to HPO mapping per COVID-19 - Githubissues

TheJacksonLaboratory / loinc2hpoAnnotation

loinc2hpo Annotation Data

https://github.com/monarch-initiative/loinc2hpo

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LOINC to HPO mapping per COVID-19 #126

Open linikujp opened 4 years ago

linikujp commented 4 years ago

Resources:

LOINC pre-released COVID-19 related terms: https://loinc.org/sars-coronavirus-2/
FDA EUA authorized IVD tests: https://www.fda.gov/medical-devices/emergency-situations-medical-devices/emergency-use-authorizations#covid19ivd

Examples to model

Roche Elecsys anti-SARS-CoV-2 serology antibody test
Roche Cobas SARS-CoV-2 (for ORF1 a/b non-structural region that is unique to SARS-CoV-2 and E-gene forr pan-Sarbecovirus detection including SARS-CoV-2 virus. (https://www.fda.gov/media/136049/download)
Abbott ID Now COVID-19 (test RdRP segment) optional

kingmanzhang commented 4 years ago

Thanks @linikujp ! @pnrobinson Are you planning to add "SARS-CoV-2 positivity" to HPO?