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TheJacksonLaboratory / scanpy_recipes

Generalized and aggregated analysis functions for working with Anndata and Scanpy
BSD 3-Clause "New" or "Revised" License
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Incorporate edgepy #20

Open wflynny opened 5 years ago

wflynny commented 5 years ago

https://github.com/r-bioinformatics/edgePy

Or something else for differential expression.

wflynny commented 5 years ago

Currently it looks like diffxpy is a bit too heavy dependency wise unless we get it containerized for our use.