TheLabbingProject / django_mri

A reusable Django app to manage MRI data.
https://django-mri.readthedocs.io/en/latest/
Apache License 2.0
7 stars 5 forks source link

fMRIprep interface + some additions to BIDS #117

Closed GalKepler closed 3 years ago

GalKepler commented 3 years ago

Created a working fMRIPrep interfaces, resolves #116 Included some modifications to BIDS path generation.

codecov[bot] commented 3 years ago

Codecov Report

Merging #117 (154fa48) into master (c81d527) will decrease coverage by 0.55%. The diff coverage is 29.36%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #117      +/-   ##
==========================================
- Coverage   46.66%   46.11%   -0.56%     
==========================================
  Files         182      184       +2     
  Lines        3401     3522     +121     
  Branches      313      344      +31     
==========================================
+ Hits         1587     1624      +37     
- Misses       1792     1873      +81     
- Partials       22       25       +3     
Impacted Files Coverage Δ
...go_mri/analysis/automation/anatomical/recon_all.py 0.00% <0.00%> (ø)
django_mri/analysis/mri_interfaces.py 0.00% <0.00%> (ø)
django_mri/utils/the_base.py 75.00% <ø> (ø)
django_mri/utils/bids.py 75.13% <16.66%> (-11.32%) :arrow_down:
...jango_mri/analysis/interfaces/fmriprep/fmriprep.py 26.38% <26.38%> (ø)
django_mri/models/scan.py 62.96% <50.00%> (-0.25%) :arrow_down:
django_mri/utils/utils.py 54.23% <60.00%> (+0.53%) :arrow_up:
django_mri/analysis/analysis_definitions.py 96.07% <100.00%> (+0.16%) :arrow_up:
...o_mri/analysis/specifications/fmriprep/fmriprep.py 100.00% <100.00%> (ø)
... and 1 more

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