Closed GalKepler closed 2 years ago
Merging #153 (d3eada0) into master (ba34f2e) will decrease coverage by
0.80%
. The diff coverage is12.60%
.
@@ Coverage Diff @@
## master #153 +/- ##
==========================================
- Coverage 43.78% 42.97% -0.81%
==========================================
Files 238 241 +3
Lines 4840 4933 +93
Branches 602 619 +17
==========================================
+ Hits 2119 2120 +1
- Misses 2698 2790 +92
Partials 23 23
Impacted Files | Coverage Δ | |
---|---|---|
...o_mri/analysis/interfaces/dmriprep_bak/dmriprep.py | 0.00% <0.00%> (ø) |
|
...o_mri/analysis/interfaces/dmriprep_bak/messages.py | 0.00% <0.00%> (ø) |
|
...ango_mri/analysis/interfaces/dmriprep_bak/utils.py | 0.00% <0.00%> (ø) |
|
django_mri/analysis/mri_interfaces.py | 0.00% <0.00%> (ø) |
|
...jango_mri/analysis/interfaces/dmriprep/dmriprep.py | 31.03% <34.78%> (-3.12%) |
:arrow_down: |
django_mri/analysis/analysis_definitions.py | 96.72% <100.00%> (ø) |
|
...jango_mri/analysis/interfaces/dmriprep/messages.py | 100.00% <100.00%> (+100.00%) |
:arrow_up: |
django_mri/analysis/interfaces/dmriprep/utils.py | 100.00% <100.00%> (ø) |
|
...o_mri/analysis/specifications/dmriprep/dmriprep.py | 100.00% <100.00%> (ø) |
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I've created an interface to dmriprep pipeline that is suited to handle TheBase complex fieldmap scheme. I've also made sure that the environment, although not set by a docker container (yet) is equipped to handle the pipeline.
The things we need to do in order to run it over our dataset are:
Anyway, this fixes #151