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TheSatoLab / KP.2_short

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where to find the "metadata.tsv" and ""/metadata.mut_long.tsv" files? #1

Closed liamxg closed 1 month ago

liamxg commented 1 month ago

Dear @ninjin-cake,

Could you tell me where to find the "metadata.tsv" and ""/metadata.mut_long.tsv" files?

ninjin-cake commented 1 month ago

Dear @liamxg, Thank you for the message. The metadata file “metadata.tsv” had been downloaded from GISAID via “Download packages”. Unfortunately, according to the data sharing policy of GISAID, we cannot re-distribute this file. With the “metadata.tsv” file, please run the summarize_mut_info.ver2.py that we have just uploaded on KP.2_short folder. Apologies for the inconvenience. Best wishes

liamxg commented 1 month ago

Hi @ninjin-cake,

Thanks. after run the summarize_mut_info.ver2.py file using metadata.tsv file as input, I get metadata.mut_long.tsv file, right?

ninjin-cake commented 1 month ago

Dear @liamxg, Yes, I believe that would work. Best regards

liamxg commented 1 month ago

@ninjin-cake, Cool, thanks.