TheoMichelot hmmTMB issues

TheoMichelot / hmmTMB

Fit hidden Markov models using Template Model Builder (TMB): flexible state-dependent distributions, transition probability structures, random effects, and smoothing splines.

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issues

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[Feature request] Avoid label switching

#27 roaldarbol opened 4 months ago
2
Improved error message for zeros in `gamma` model

#25 roaldarbol opened 4 months ago
2
`HMM$plot_dist()` fails with `gamma` distribution

#24 roaldarbol closed 4 months ago
3
`Observation$suggest_initial()` error

#23 roaldarbol closed 4 months ago
4
Persisting error "Log-likelihood is NaN or infinite at starting parameters" on dataset with many very small values

#21 orijitghosh closed 4 months ago
2
plot_dist and plot_ts not working with covariates?

#19 RonEfrat closed 6 months ago
3
change "dll" to "DLL" in MakeADFun

#17 bmcclintock closed 1 year ago
1
Deprecated ggplot syntax

#16 TheoMichelot closed 3 years ago
0
Random effect names not stored properly

#15 TheoMichelot closed 2 years ago
1
Smoothing parameters have zero variance

#14 TheoMichelot closed 3 years ago
2
"round" better than "floor" to test whole numbers

#13 TheoMichelot closed 2 years ago
1
Multiple penalties on the same parameters

#12 r-glennie closed 3 years ago
3
Degrees of freedom

#11 r-glennie closed 3 years ago
3
State probabilities out of range

#10 TheoMichelot closed 3 years ago
1
Error in `HMM$pseudores`

#9 TheoMichelot closed 3 years ago
1
Error in HMM$predict for tpm with covariates

#8 TheoMichelot closed 3 years ago
1
optimx warning message about parameter scaling

#7 TheoMichelot closed 3 years ago
1
Non-symmetric Hessian

#6 TheoMichelot closed 3 years ago
1
Calls to cov_grid need to be updated

#5 TheoMichelot closed 3 years ago
1
stan and tmbstan with R/Makevars

#4 r-glennie closed 1 year ago
0
Roxygen not working

#3 TheoMichelot closed 3 years ago
2
Alternative way to specify models?

#2 r-glennie closed 3 years ago
7
Removed coeff_fe and coeff_re arguments to obs

#1 r-glennie closed 3 years ago
1