CBIG_fMRI_Preproc2016 without downsampling

[peter3200]

Expected situation

Use the CBIG_fMRI_Preproc2016 pipeline without downsampling to fsaverage5 space by editing the example_config.txt file to remove the -down flag:

CBIG_preproc_native2fsaverage -proj fsaverage6 -sm 6

Actual situation

Files with the fsaverage5 mesh are still created as documented in the native2fsaverage log:

The fMRI_preprocess log indicates that it cannot find files ending in the 'fs6_sm6_fs' suffix:

Thanks for your help! Maddy

[peter3200]

Issue was resolved by setting the -down flag to fsaverage6 in the config file:

CBIG_preproc_native2fsaverage -proj fsaverage6 -sm 6 -down fsaverage6