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ThomasYeoLab / CBIG

MIT License
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Replicate the work of Schaefer #51

Open ZhaojinChen opened 8 months ago

ZhaojinChen commented 8 months ago

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Dear CBIG community:

Hello! I think you guys did a great job on the human brain parcelation. Recently, I've been trying to use your method to generate the parcellation of our animal model. So I used Gordon's method to generate the boundary files and I obtained 32k boundaries and averaged them which seems different from your methods. I see the boundary file you provided and its name is waterfiles. mat. I think that you obtain the gradient matrix 32k*32k and average by row and then obtain the segmented_lines. Is that true?

Besides, I'm trying to use the MARS_computeLogOdds to generate the border with the file you provided. However, after compiling the MARS_DT_Boundary.c file, I encountered an unexpected error that the system could find the MARS_DT_Boundary.mexw64 though I ran code in this folder. I guess it might be caused by the system gap because I use Windows system to do that.

Looking forwards to your reply.

Regards, Zhaojin

rubykong commented 4 months ago

@ZhaojinChen CBIG scripts so far do not support Windows.