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Tian-Dechao / diffDomain

DiffDomain is a statistically sound method for detecting differential TADs between conditions
MIT License
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output results #14

Open tan5251 opened 9 months ago

tan5251 commented 9 months ago

Hi. I campare condition1 to condition2. How to know the differential TAD (strength type) is more strength in condition1 or condition2 ?

mingbao96 commented 9 months ago

Hi, Thanks for reaching out your question.

The related method has been published in our newly released article, which you can check out if interested. We plan to update the codes and add this functionality to our package soon. You are welcome to follow and use it.

Best wishes.

PinpinSui commented 7 months ago

Hello,

Thank you so much for this wonderful tool! I read the methods and found one paragraph about the strength up or down. How can I use diffDomain to determin up or down?

Thank you,

Pinpin Sui

liuyc27 commented 2 months ago

Hi @PinpinSui,

Usage and Example 2 sections on the Wiki have been updated to introduce the methods for distinguishing between strength-change up and strength-change down TADs.For details, please refer to the following links:

Thank you!