how to make the input data for synteny_dual_comparison

TickingClock1992 / RIdeogram

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how to make the input data for synteny_dual_comparison #15

Closed niuhuifei closed 4 years ago

niuhuifei commented 4 years ago

Thanks for this good tool. I am new for this software and can you give some information of how to make the input file for synteny analysis, I mean transfer the resulted .collinearity file from MCScanX into RIdeogram because the file from MCScan have no chromosome info. Many thanks.

TickingClock1992 commented 4 years ago

Then, you just need the genome annotation file to connect the gene id to its positional information in chromosomes.