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TileDB-Inc / TileDB-VCF

Efficient variant-call data storage and retrieval library using the TileDB storage library.
https://tiledb-inc.github.io/TileDB-VCF/
MIT License
83 stars 13 forks source link

The nightly build job failed on Wednesday (2023-11-29) #625

Closed github-actions[bot] closed 7 months ago

github-actions[bot] commented 7 months ago

The nightly build job failed on Wednesday (2023-11-29) in run 7041441147

awenocur commented 7 months ago

This build failed on macOS because of a symbol missing from the Embedded dylib: _tiledb_field_datatype. I'll try re-running before investigating further; I suspect the build and import may be pulling in different core versions.

github-actions[bot] commented 7 months ago

The nightly build job failed on Wednesday (2023-11-29) in run 7041441147

awenocur commented 7 months ago

Re-running results in the same error.

awenocur commented 7 months ago

This is happening because the nightly build is installing a binary of the Python connector, version 24.0, which is linked against Embedded 2.18. Embedded 2.17, which is built from source, does not support fields via the C API.

github-actions[bot] commented 7 months ago

The nightly build job failed on Thursday (2023-11-30) in run 7055185229

github-actions[bot] commented 7 months ago

The nightly build job failed on Friday (2023-12-01) in run 7067631363

github-actions[bot] commented 7 months ago

The nightly build job failed on Saturday (2023-12-02) in run 7074278335

github-actions[bot] commented 7 months ago

The nightly build job failed on Sunday (2023-12-03) in run 7081447003

github-actions[bot] commented 7 months ago

The nightly build job failed on Monday (2023-12-04) in run 7095596800

github-actions[bot] commented 7 months ago

The nightly build job failed on Tuesday (2023-12-05) in run 7109605264