TimoLassmann / tagdust

A tool to extract mappable reads from various library preparation protocols.
GNU General Public License v3.0
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can't make #4

Open liuyuchenlab opened 1 year ago

liuyuchenlab commented 1 year ago

hi i have a problem. Making all in src make[1]: Entering directory '/disk5/lyc/biosoft/tagdust-master/src' make all-am make[2]: Entering directory '/disk5/lyc/biosoft/tagdust-master/src' gcc -O2 -funroll-loops -Wall -std=gnu99 -o tagdust tagdust-kslib.o tagdust-main.o tagdust-interface.o tagdust-nuc_code.o tagdust-misc.o tagdust-io.o tagdust-barcode_hmm.o tagdust-calibrateQ.o tagdust-test_architectures.o -lpthread -lm /usr/bin/ld: tagdust-nuc_code.o:(.bss+0x20): multiple definition of nuc_code'; tagdust-main.o:(.bss+0x20): first defined here /usr/bin/ld: tagdust-nuc_code.o:(.bss+0x0): multiple definition ofrev_nuc_code'; tagdust-main.o:(.bss+0x0): first defined here /usr/bin/ld: tagdust-misc.o:(.bss+0xfa00): multiple definition of rev_nuc_code'; tagdust-main.o:(.bss+0x0): first defined here /usr/bin/ld: tagdust-misc.o:(.bss+0xfa20): multiple definition ofnuc_code'; tagdust-main.o:(.bss+0x20): first defined here /usr/bin/ld: tagdust-io.o:(.bss+0x20): multiple definition of nuc_code'; tagdust-main.o:(.bss+0x20): first defined here /usr/bin/ld: tagdust-io.o:(.bss+0x0): multiple definition ofrev_nuc_code'; tagdust-main.o:(.bss+0x0): first defined here /usr/bin/ld: tagdust-barcode_hmm.o:(.bss+0x20): multiple definition of nuc_code'; tagdust-main.o:(.bss+0x20): first defined here /usr/bin/ld: tagdust-barcode_hmm.o:(.bss+0x0): multiple definition ofrev_nuc_code'; tagdust-main.o:(.bss+0x0): first defined here /usr/bin/ld: tagdust-test_architectures.o:(.bss+0x0): multiple definition of rev_nuc_code'; tagdust-main.o:(.bss+0x0): first defined here /usr/bin/ld: tagdust-test_architectures.o:(.bss+0x20): multiple definition ofnuc_code'; tagdust-main.o:(.bss+0x20): first defined here collect2: error: ld returned 1 exit status make[2]: [Makefile:788: tagdust] Error 1 make[2]: Leaving directory '/disk5/lyc/biosoft/tagdust-master/src' make[1]: [Makefile:668: all] Error 2 make[1]: Leaving directory '/disk5/lyc/biosoft/tagdust-master/src' make: *** [Makefile:352: all-recursive] Error 1

emidalla commented 4 months ago

Hello @TimoLassmann I am having exactly the same error