Open vjmarteau opened 2 years ago
Example YAML header on one of my notebooks
You can edit the YAML header to change the behaviour of your notebook when exported (see output).
"params" can be used to read in different paths that you might want to use. (Can be accessed using params$data, etc ...)
Often it is nice to have any code for data wrangling in separate scripts that are called and to use the notebooks to plot and discuss data/figures.
Example YAML header on one of my notebooks
title: "01-Reformat_to_SummarizedExperiment" author: "Valentin Marteau" params: data: "../data" results: "../results" lib: "../lib" maxcores: 6 output: html_notebook: theme: spacelab highlight: textmate toc: yes number_sections: true toc_depth: 3 toc_float: true
You can edit the YAML header to change the behaviour of your notebook when exported (see output).
"params" can be used to read in different paths that you might want to use. (Can be accessed using params$data, etc ...)
Often it is nice to have any code for data wrangling in separate scripts that are called and to use the notebooks to plot and discuss data/figures.