TinkerTools / poltype2

Poltype 2: Automated Parameterization and Free Energy Prediction for AMOEBA
Other
41 stars 11 forks source link

Fragmenter option for generating the parameter #56

Open pradipchm opened 2 months ago

pradipchm commented 2 months ago

Hi, I am new to amoeba force field and still trying to understand the every steps of poltype2 calculation. I am getting an error while using dontfrag as default False, but if I use True there is no error. Is it fine to calculate without fragmenting or what is the purpose of fragmenting? I appreciate your suggestion.