TissueEngineeringLab / MyoFInDer

Python interface for automatic calculation of the fusion index in muscle cell cultures
https://tissueengineeringlab.github.io/MyoFInDer/
GNU General Public License v3.0
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Authentication needed to download models #7

Closed WeisLeDocto closed 1 year ago

WeisLeDocto commented 1 year ago

After installing MyoFInDer successfully, the following error message appears when starting it for the first time :

ValueError: 
DEEPCELL_ACCESS_TOKEN not found.
Please set your access token to the DEEPCELL_ACCESS_TOKEN
environment variable.
For example:

    export DEEPCELL_ACCESS_TOKEN=<your-token>.

If you don't yet have a token, you can create one at
https://users.deepcell.org

This bug is platform- and python version-independent. It is caused by the new access token system introduced in the recent releases of the DeepCell library.

A possible quick-and-dirty fix on the short term is to simply force the installation of DeepCell==0.12.7, which does not feature an authentication mechanism.