TissueImageAnalytics tiatoolbox issues

TissueImageAnalytics / tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

https://warwick.ac.uk/tia

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[pre-commit.ci] pre-commit autoupdate

#829 pre-commit-ci[bot] opened 1 day ago
0
[skip ci] :memo: Enhance Download Paths in `10-wsi-registration.ipynb`

#828 shaneahmed closed 1 week ago
2
:white_check_mark: Add Test to Reset `logger` Filters.

#827 shaneahmed closed 1 week ago
1
[pre-commit.ci] pre-commit autoupdate

#826 pre-commit-ci[bot] closed 1 week ago
1
🆕Multichannel Image Reading

#825 measty opened 1 week ago
1
🐛 Fix Type Annotation for `annotation/storage.py`

#824 Jiaqi-Lv closed 1 week ago
1
[pre-commit.ci] pre-commit autoupdate

#823 pre-commit-ci[bot] closed 2 weeks ago
1
🆕 Use Annotations as a Filter for Patch Extraction

#822 measty opened 2 weeks ago
1
:pushpin: Update `ruff` version.

#821 shaneahmed closed 3 weeks ago
1
Image Registration feature request

#820 sm-ak-r33 closed 4 days ago
3
Empty slide visualizer on a remote machine

#819 coolmule0 closed 4 weeks ago
1
[pre-commit.ci] pre-commit autoupdate

#818 pre-commit-ci[bot] closed 4 weeks ago
1
Difference in CoNSeP results

#817 FabianHoerst closed 2 weeks ago
2
[pre-commit.ci] pre-commit autoupdate

#816 pre-commit-ci[bot] closed 1 month ago
1
[pre-commit.ci] pre-commit autoupdate

#815 pre-commit-ci[bot] closed 1 month ago
1
🐛 Fix Code Complexity in `wsireader`

#814 shaneahmed closed 2 months ago
1
🐛 Fix Rendering Annotations with Holes

#813 measty closed 2 months ago
2
[pre-commit.ci] pre-commit autoupdate

#812 pre-commit-ci[bot] closed 2 months ago
1
:bug: Fix `codecov` Reporting

#811 shaneahmed closed 2 months ago
1
Enhance download paths in the examples notebooks

#810 GeorgeBatch closed 1 week ago
2
[pre-commit.ci] pre-commit autoupdate

#809 pre-commit-ci[bot] closed 2 months ago
1
PanNuke TCGA-Slide List

#808 FabianHoerst closed 2 months ago
2
Add support for `ignore_is_tiled_tiff` in `WSIReader.open()`

#807 GeorgeBatch closed 2 months ago
21
Add `mypy` type check to `annotation/`

#806 Jiaqi-Lv closed 3 weeks ago
1
[pre-commit.ci] pre-commit autoupdate

#805 pre-commit-ci[bot] closed 2 months ago
0
`.tif` file from Ventana scanner is not parsed properly with WSIReader; openslide works well on its own

#804 GeorgeBatch closed 2 months ago
2
Tiatoolbox stopped working after generating yml file. SSL problem with openslide?

#803 KenAncheta closed 2 months ago
4
[pre-commit.ci] pre-commit autoupdate

#802 pre-commit-ci[bot] closed 2 months ago
1
Add `mypy` Type Check to `wsi_registration.py`

#801 Jiaqi-Lv closed 3 months ago
1
⚡️Refine `torch.compile` and Add to WSI Registration

#800 Abdol closed 2 weeks ago
3
:pushpin: Fix `docs/requirements.txt` for `sphinx-design`

#799 shaneahmed closed 3 months ago
1
[pre-commit.ci] pre-commit autoupdate

#798 pre-commit-ci[bot] closed 3 months ago
1
🧑‍💻 Replace `black` with `ruff` Formatter

#797 shaneahmed closed 3 months ago
2
:alien: Change `size` to `radius` for `bokeh 3.4` Compatibility

#796 measty closed 3 months ago
1
:children_crossing: Refactor `cli.visualize` to Improve `cli` Response

#795 shaneahmed closed 3 months ago
1
[pre-commit.ci] pre-commit autoupdate

#794 pre-commit-ci[bot] closed 3 months ago
1
Reading CZI files

#793 KenAncheta closed 3 months ago
2
📝 Fix a Typo in `examples/README.md`

#792 moodyhunter closed 3 months ago
1
Kernel keeps dying while trying to create image masks

#791 ShataDg closed 2 months ago
2
Runtime of UNet Breast Cancer Segmenter

#790 rictoo closed 2 months ago
4
🆕 Add Reading Slide-level info & Simple Plugins for Visualization Tool

#789 measty opened 4 months ago
1
[pre-commit.ci] pre-commit autoupdate

#788 pre-commit-ci[bot] closed 4 months ago
1
:hammer: Add `mypy` Type Check to `stainnorm`, `stainaugment`, `patchextraction`

#787 Jiaqi-Lv closed 3 months ago
2
:pushpin: Update minimum Python version to `3.9`

#786 shaneahmed closed 4 months ago
2
📌 Update `wsidicom` dependency

#785 shaneahmed closed 4 months ago
3
[pre-commit.ci] pre-commit autoupdate

#784 pre-commit-ci[bot] closed 4 months ago
1
🧑‍💻 Define `PatchPredictor`

#783 shaneahmed opened 4 months ago
3
:hammer: `mypy` type check `tools/`

#782 Jiaqi-Lv closed 4 months ago
2
[pre-commit.ci] pre-commit autoupdate

#781 pre-commit-ci[bot] closed 4 months ago
1
NucleusInstanceSegmentor.predict() has no "patch" mode

#780 alevangel opened 5 months ago
2