plot transcript view table

[mavino]

Hi there, is there a way to get, after having run plot_transcripts_view() on my dturtle object, a table with all the values of the mean fitted proportional changes per transcript per gene? Thanks a lot.

[TobiTekath]

HI @mavino,

if I understand your request correctly, you might want to call the internal get_diff() function. You can use it like this: DTUrtle:::get_diff("gene_of_interest", dturtle_object)

The fitted proportions are computed in the run_drimseq() step, thus independently of the plot_transcripts_view() calls.

Hope that helps. Best, Tobi

[mavino]

great!! thanks a lot