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TomHarrop
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tcdemux
GNU General Public License v3.0
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Upgrade to snakemake 8
#26
TomHarrop
opened
3 months ago
0
add quality trimming to final step
#25
TomHarrop
closed
3 months ago
0
Quality filtering?
#24
TomHarrop
closed
3 months ago
2
Deal with change in bbmap log format
#23
TomHarrop
opened
5 months ago
0
Scaling resources using params doesn't seem to work
#22
TomHarrop
opened
11 months ago
0
don't count containments, it takes too long
#21
TomHarrop
closed
11 months ago
0
Set mem and threads to global resources to avoid the oom killer
#20
TomHarrop
closed
11 months ago
0
Stats
#19
TomHarrop
closed
12 months ago
0
hook into snakemake logger
#18
TomHarrop
closed
1 year ago
0
use periods for delimiting read number so that we can parse the sampl…
#17
TomHarrop
closed
1 year ago
0
try using python only
#16
TomHarrop
closed
1 year ago
0
add test for missing files (fixes #14)
#15
TomHarrop
closed
1 year ago
0
Deal with missing samples
#14
TomHarrop
closed
1 year ago
1
Added test for special characters in filenames (fixes #11)
#13
TomHarrop
closed
1 year ago
0
memory for repair
#12
TomHarrop
closed
1 year ago
0
Need to sanitize the sample_data
#11
TomHarrop
closed
1 year ago
0
Allow parallel demux but be stricter with RAM (#7)
#10
TomHarrop
closed
1 year ago
0
Hard code RAM and prevent more than one demux job (#7)
#9
TomHarrop
closed
1 year ago
0
Try setting threads and using less ram for barcode check (issue #7)
#8
TomHarrop
closed
1 year ago
0
Barcode check using more RAM than allocated
#7
TomHarrop
closed
1 year ago
3
How indexes in the sample data are used depends on seq platform
#6
TomHarrop
opened
1 year ago
0
0.0.7
#5
TomHarrop
closed
1 year ago
0
0.0.6
#4
TomHarrop
closed
1 year ago
0
update thread logic
#3
TomHarrop
closed
1 year ago
0
try installing to site-packages
#2
TomHarrop
closed
1 year ago
0
Package
#1
TomHarrop
closed
1 year ago
0