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ToolsVanBox / PTATO

PTa Analysis TOolkit
MIT License
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SnpSift container not available #20

Open domivika opened 9 months ago

domivika commented 9 months ago

Hello,

While trying to run PTATO 1.3.3 I had an issue with pulling the SnpSift container:

https://github.com/ToolsVanBox/PTATO/blob/eafc29c4d887b4ba4795cb9cbff401e9bc621ef5/NextflowModules/SnpSift/4.3.1t--1/SnpSift.nf#L4

Apparently, it is not available anymore, and pulling the singularity image from another source is required.

mroosmalen commented 4 months ago

Sorry for the late response,. For now I have added the container here:

https://surfdrive.surf.nl/files/index.php/s/l3FX6eLnTtuVK1g?path=%2Fcontainers