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Topp-Roots-Lab / 3d-root-crown-analysis-pipeline

A pipeline to process 3-D volumes (.raw) of maize root crowns. Also known as XRCAP.
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vhist #52

Open TheSnowCat opened 1 year ago

TheSnowCat commented 1 year ago

Only 20 bins in biomass, convexhull, solidity vhists even when root scan > 20cm

tparkerd commented 1 year ago

Hey @TheSnowCat , is this still an issue? If you need more than the default 20 cm, you have to specify a depth in millimeters at runtime (e.g., rootCrownImageAnalysis3D /data --depth 300 for 30 cm)—IIRC.