Topp-Roots-Lab / 3d-root-crown-analysis-pipeline

A pipeline to process 3-D volumes (.raw) of maize root crowns. Also known as XRCAP.
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Way to easily register skeleton to volume data #53

Open kenanoestreich opened 1 year ago

kenanoestreich commented 1 year ago

Is your feature request related to a problem? Please describe. It would be very useful to be able to visualize the skeleton overlaid on the grayscale images or the thresholded binary slices.

Describe the solution you'd like See title

Describe alternatives you've considered Could also involve including some orientation information with the skeleton, so a script could be written to match them.

Additional context Not entirely sure how do-able this is with point cloud data.