Transipedia / dekupl-run

Identify differentially expressed k-mers between RNA-Seq datasets
MIT License
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make sure `sort` uses specified temp directory, refs #52 #53

Closed amirkdv closed 5 years ago

amirkdv commented 5 years ago

See #52.

Additionally I suggest (not in this PR) changing the default value for TMP_DIR from os.getcwd() to OUTPUT_DIR/tmp because:

jaudoux commented 5 years ago

Thanks again @amirkdv for this new PR. I also agree with you about the location of the TMP_DIR by default, I'll update that!