TranslatorSRI / NodeNormalization

Service that produces Translator compliant nodes given a curie
MIT License
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investigate missed drug mappings between UMLS and MESH #162

Open andrewsu opened 1 year ago

andrewsu commented 1 year ago

Node Normalizer currently reports no mappings to MESH for tamoxifen: https://nodenormalization-sri.renci.org/1.3/get_normalized_nodes?curie=UMLS:C0039286. But the UMLS metathesaurus browser does include MESH mapping (https://uts.nlm.nih.gov/uts/umls/concept/C0039286 -> D013629)

Same applies to ribavirin:

and levodopa

andrewsu commented 1 year ago

Just realized that the correct mappings from these UMLS IDs to MeSH IDs are being returned by the prod instance of Node Normalizer:

But I'll leave this issue open in case dev is being used to test release candidates to prod.

gaurav commented 1 year ago

Yes, we’re hoping to push dev to prod soon, so this would be great to fix before we do!---Typed on a tiny phone.On Feb 7, 2023, at 12:43 PM, Andrew Su @.***> wrote: Just realized that the correct mappings from these UMLS IDs to MeSH IDs are being returned by the prod instance of Node Normalizer:

https://nodenorm.transltr.io/1.3/get_normalized_nodes?curie=UMLS:C0039286 https://nodenorm.transltr.io/1.3/get_normalized_nodes?curie=UMLS:C0035525 https://nodenorm.transltr.io/1.3/get_normalized_nodes?curie=UMLS:C0023570

But I'll leave this issue open in case dev is being used to test release candidates to prod.

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