Workaround for missing type information

TranslatorSRI / NodeNormalization

Service that produces Translator compliant nodes given a curie

MIT License

9 stars 6 forks source link

Closed gaurav closed 6 months ago

gaurav commented 8 months ago

This PR provides a workaround for #221 by:

Logging an error when an ID doesn't have type information for some reason.
Reporting such an identifier back to the user as not found, without causing the entire batch to fail (closes #222)
Assuming that any identifier missing type information can be assumed to be a biolink:NamedThing (closes #221).

Closes #221.

gaurav commented 6 months ago

I think that this defensive approach is reasonable, but the real question is why does this happen in the first place?