Open gaurav opened 5 months ago
NCBIGene:6052 doesn't have a label, but it does have one at https://www.ncbi.nlm.nih.gov/gene/?term=6052
It also has name and label information in gene_info.gz:
gene_info.gz
#tax_id GeneID Symbol LocusTag Synonyms dbXrefs chromosome map_location description type_of_gene Symbol_from_nomenclature_authority Full_name_from_nomenclature_authority Nomenclature_status Other_designations Modification_date Feature_type 9606 6052 RNR1 - - MIM:180450|HGNC:HGNC:10082 13 13p12 RNA, ribosomal 45S cluster 1 other RNR1 RNA, ribosomal 45S cluster 1 O 45S rDNA cluster 1|RNA, ribosomal 1|RNA, ribosomal cluster 1|Ribosomal RNA-1 20220508 -
This appears to be because it is type other, which is skipped when generating label and synonym files:
other
https://github.com/TranslatorSRI/Babel/blob/f7ed8f0736c799c1389d3f5b0a2d045634da2e46/src/datahandlers/ncbigene.py#L60-L61
We should pick up a preferred label from OMIM, but we don't appear to use OMIM labels at all.
NCBIGene:6052 doesn't have a label, but it does have one at https://www.ncbi.nlm.nih.gov/gene/?term=6052
It also has name and label information in
gene_info.gz:This appears to be because it is type
other, which is skipped when generating label and synonym files:https://github.com/TranslatorSRI/Babel/blob/f7ed8f0736c799c1389d3f5b0a2d045634da2e46/src/datahandlers/ncbigene.py#L60-L61
We should pick up a preferred label from OMIM, but we don't appear to use OMIM labels at all.