ingest of monarch.owl into kgx

TranslatorSRI / reference-kg

Reference knowledge graph for translator II

0 stars 0 forks source link

ingest of monarch.owl into kgx #3

Closed kshefchek closed 4 years ago

kshefchek commented 4 years ago

options:

robot -> obo json
kg-covid process created by @matentzn, https://github.com/obophenotype/covid-kg-ontology-preprocessing
monarch-merged.owl from https://archive.monarchinitiative.org/202008/owl/monarch-merged.owl

deepakunni3 commented 4 years ago

@matentzn The goal here is to convert monarch.owl to an OBO Graph JSON format. But we would want to do some sensible robot operations on the owl like converting owl:equivalentClass to owl:subClassOf via robot relax

Curious to hear your thoughts on this :)