Ideas for experiments that can only be done in the faster boolean framework.

Treblesteph / network_evo

For the evolution of genetic networks

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Ideas for experiments that can only be done in the faster boolean framework. #46

Open Treblesteph opened 9 years ago

Treblesteph commented 9 years ago

coupled clocks between cells in plant (i.e. roots responding to light without sensing directly)
- spatial model
- coupling factor between adjacent cells
jet lag experiments
- fitness dependant on recovery time
- phase shifting

Treblesteph commented 9 years ago

Temperature compensation experiment:

additional environmental input (temperature)
affecting lags
would also affect degradation rate maybe..
will speak to Mirela who has previously modelled temperature compensation in the clock

Treblesteph commented 9 years ago

Something based on the complexity of the modelling system rather than the biological questions. For example different logical gate rules (with combinations of and/or for incoming interactions) or for different levels of individual genes etc.