Open wolfgangrumpf opened 5 years ago
Hi,
NCLscan cannot apply to long reads.
But, our team now is developing another NCL tool on long-reads (PacBio/Nanopore). This new tool still needs a non-co-linear result (fusion, trans-splicing, and circular RNAs) from short-reads and looks for full-length of a non-co-linear event using long-reads.
Chia-Ying
That's great news - do you need testers? When do you expect the tool to be ready?
Yes, we do need testers. Thanks for your generous help. The longNCL tool is planning to release in GitHub within 2 weeks. I will let you know when it is ready. Keep in touch:)
Chia-Ying
Is there a way to run NCLscan on non-paired-read data (e.g. PacBio output)?