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TreesLab / circRNA_ASD

Geneme-wide, integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism
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missing file ‘datExpr_134s.txt’ when running step1 for LME model #3

Open dongdongdong11 opened 4 years ago

dongdongdong11 commented 4 years ago

Dear Pro. I’m reading your paper titled “Genome-wide integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism”. I am very interested in the method you mentioned in your paper and try to follow your research. But when I run the code in step1 for LME model . I found that the file "datExpr_134s.txt" is missing. Can you provide it for me? Thank you so much. Best regard.

chenchiaying commented 4 years ago

Hi, Since the sizes of the files (datExpr_134s.txt and DEcirc_mRNA_spearman.txt) are over the limitation of GitHub (50Mb), we deposited these two files in our FTP site at ftp://treeslab1.genomics.sinica.edu.tw/treeslabtools/circRNA_ASD.

dongdongdong11 commented 4 years ago

Dear pro: Thank you so much. I found the data in your FTP site and solve the problem. Best regard.