zipfile.BadZipFile: File is not a zip file

[wx904]

Hi,

I installed CTAT-Mutations via Docker. Everything went well until running this command: $ oc module install-base

Here is the error message:

Could you pls help me out of this?

Thx, WX

[brianjohnhaas]

Hi,

If the cravat installation is giving trouble here, you could just unpack this: https://data.broadinstitute.org/Trinity/CTAT_RESOURCE_LIB/MUTATION_LIB_SUPPLEMENT/cravat_lib/

in your ctat genome lib, and hopefully that'll work for you. This is the cravat lib that we use in our installation.

best,

~brian

On Thu, Dec 22, 2022 at 12:03 AM wx904 @.***> wrote:

Hi,

I installed CTAT-Mutations via Docker. Everything went well until running this command: $ oc module install-base

Here is the error message: [image: image] https://user-images.githubusercontent.com/53553660/209060065-7f916610-8b0e-456b-8afc-0ccc339e0e4e.png

Could you pls help me out of this?

Thx, WX

— Reply to this email directly, view it on GitHub https://github.com/NCIP/ctat-mutations/issues/124, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABZRKX5Y2RTAYP4UZHPRMQDWOPOJVANCNFSM6AAAAAATGKG3DY . You are receiving this because you are subscribed to this thread.Message ID: @.***>

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[wx904]

Hi brian,

It does work! Thanks a lot~

best, WX

[brianjohnhaas]

great to hear!

On Mon, Dec 26, 2022 at 1:39 AM wx904 @.***> wrote:

Hi brian,

It does work! Thanks a lot~

best, WX

— Reply to this email directly, view it on GitHub https://github.com/NCIP/ctat-mutations/issues/124#issuecomment-1364935022, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABZRKX3MG2NLPOHXKYMS65TWPE4SXANCNFSM6AAAAAATGKG3DY . You are receiving this because you commented.Message ID: @.***>

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Brian J. Haas The Broad Institute http://broadinstitute.org/~bhaas http://broad.mit.edu/~bhaas