hg19 igv report html appears broken (works fine for hg38 though)

TrinityCTAT / ctat-mutations

Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19

https://github.com/TrinityCTAT/ctat-mutations

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hg19 igv report html appears broken (works fine for hg38 though) #132

Open brianjohnhaas opened 6 months ago

brianjohnhaas commented 6 months ago

examine the igvreports create_report call to see how it differs from hg38. The table column headers don't appear to be getting fed into the html properly.