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TrinityCTAT / ctat-mutations

Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19
https://github.com/TrinityCTAT/ctat-mutations
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Devel #17

Closed brianjohnhaas closed 5 years ago

brianjohnhaas commented 5 years ago

capture MuPIT and CRAVAT scores into mutation table

store cravat header in meta/ subdir

moved old igv_reports/ to deprecated folder, eventually remove altogether

updated igv-reports usage to v0.9.1 compatibility