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TrinityCTAT / ctat-mutations

Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19
https://github.com/TrinityCTAT/ctat-mutations
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rna-editing annotations not as comprehensive on GRCh38 vs hg19 #37

Open brianjohnhaas opened 4 years ago

brianjohnhaas commented 4 years ago

some cases are showing up as likely rna-editing sites on grch38 and not in the hg19 run. Must investigate further.