The headers of the original system.top file are ignored and then just simply changed to #include "martini.itp". I think insane.py should respect the prevopis original header or preprocessing options, for example including different martini specifications files or specifying custom system itp files.
When dealing with the
insane.py
script I noticed that when solvating a CG protein withThe headers of the original
system.top
file are ignored and then just simply changed to#include "martini.itp"
. I thinkinsane.py
should respect the prevopis original header or preprocessing options, for example including different martini specifications files or specifying custom system itp files.