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TuragaLab / DECODE

This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accuracy" (Nature Methods)
GNU General Public License v3.0
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Google Colab Notebook v0.10 may be outdated? #233

Open Haydnspass opened 8 months ago

Haydnspass commented 8 months ago

Discussed in https://github.com/TuragaLab/DECODE/discussions/229

Originally posted by **Abdullah12Husain** February 21, 2024 Hello, I have been using DECODE for the last year or so and it has always worked smoothly in Google Colab. Most recently, however, I came across an error when running the actual "start the training" cell. I'm no pro in Python, but I'm gathering that maybe the numpy library has been updated to where some elements of the original code no longer work as intended. Does the code need to be updated, and if so, could you please provide an updated code or just the changes that need to be made? I would like to use DECODE soon to process some data so any help will be much appreciated! Thanks, Abdullah ![Capture](https://github.com/TuragaLab/DECODE/assets/153212577/4772e788-97fe-4cd0-9f95-70b8a6c641fb)