Update package dependencies

[fbanados]

In the last year, there have been some changes on the python environment that must be accounted for:

• [x] current lock file depends on codecov==2.1.12 which has been removed from pypi, according to https://about.codecov.io/blog/message-regarding-the-pypi-package/ . We should eventually remove this dependency completely.
• [x] dependency on nb-black and jupyterlab should be removed. These should not be part of the server dictionary.
• [x] current dependency on deprecated triu function from scipy.linalg inside a package requires a specific scipy==1.10.1 dependency.

Although the long-term goal is to do #1168 , increasing the precision of current dependencies should account for most of the issues without requiring major code changes.

[fbanados]

Some of these will also aid in fixing #1164