Closed dave-doty closed 2 years ago
If IDT fields are specified with plate and well positions, scadnano should be able to write a plate map showing strand names in the well positions.
The method Design.plate_maps_markdown was implemented, which outputs Markdown representations of plate maps.
Design.plate_maps_markdown
This helps to organize and visualize strands in an experiment by visually laying out where the strands are in a 96-well or 384-well plate.
No unit tests. The example in the issue #210 was run, and some other examples for a current wet lab project.
If IDT fields are specified with plate and well positions, scadnano should be able to write a plate map showing strand names in the well positions.
Description
The method
Design.plate_maps_markdownwas implemented, which outputs Markdown representations of plate maps.Related Issue
210
Motivation and Context
This helps to organize and visualize strands in an experiment by visually laying out where the strands are in a 96-well or 384-well plate.
How Has This Been Tested?
No unit tests. The example in the issue #210 was run, and some other examples for a current wet lab project.
Screenshots (if appropriate):